BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E05SP1|AL424974
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 1765 0.0
>3x_Contig1295
Length = 7117
Score = 1765 bits (875), Expect = 0.0
Identities = 952/989 (96%), Gaps = 4/989 (0%)
Strand = Plus / Plus
Query: 3 tttaactgtgccgttgcccttggtgtgcaaaagaagatcttggataacgatttaactaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttaactgtgccgttgcccttggtgtgcaaaagaagatcttggataacgatttaactaaa 132
Query: 63 aacatctttgamaagggtaacttgatgggtcagamattgaagaaatctctgccagcytac 122
||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 133 aacatctttgaaaagggtaacttgatgggtcagaaattgaagaaatctctgctagcttac 192
Query: 123 gataacatcgtcggtgatgtcagaggtattggtggattctggtccttagaatttgtcaag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gataacatcgtcggtgatgtcagaggtattggtggattctggtccttagaatttgtcaag 252
Query: 183 gacagagaaacaaaggaaccattcccatacmagcytgacgttggtcaccgtttccmagat 242
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 253 gacagagaaacaaaggaaccattcccatacaagcttgacgttggtcaccgtttccaagat 312
Query: 243 gtatgtytcgaaaatggaatyactgtcatgggtatgccaggmaacatcgacggtgtttct 302
|||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 313 gtatgtttcgaaaatggaattactgtcatgggtatgcaaggaaacatcgacggtgtttct 372
Query: 303 ggtgatattgcyttgttggcaccatcattcatcatcaccgaagacgatgtctccaccatt 362
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggtgatattgctttgttggcaccatcattcatcatcaccgaagacgatgtctccaccatt 432
Query: 363 gtggaaagagtcaccaagtctgtcgatgatatgaccgtyctactaaaggctgaaggc-at 421
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||
Sbjct: 433 gtggaaagagttaccaagtctgttgatgatatgaccgttctactaaaggctgaaggccat 492
Query: 422 ttctgagaaggcttcagctgtgcyaagtattcyaacgactatatmacggcacatacgtag 481
||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 493 ttctgagaaggcttcagctgtgctaagtattctaacgactatataacggcacatacgtag 552
Query: 482 acgtattgtgccacctcttctctgtacttgttctttaamactccatgtctcatcataaca 541
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 553 acgtattgtgccacctcttctctgtacttgttctttaaaactccatgtctcatcataaca 612
Query: 542 gtcatgtgtcaagcaaatcagttccttttttcctaatatytttytgacactttgaacctt 601
|| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 613 gttatgtgtcaagcaaatcagttccttttttcctaatatttttttgacactttgaacctt 672
Query: 602 taagctgtttttattcgcgtaaatgtatatcatymacaaagtgatcgamactmaaatatc 661
|||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||
Sbjct: 673 taagctgtttttattcgcgtaaatgtatattattaacaaagtgatcgaaactaaaatatc 732
Query: 662 agcmggaaagtcaaamatagaaggccgagttaagggtcctacattaacatcaacgtagta 721
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agcaggaaagtcaaaaatagaaggccgagttaagggtcctacattaacatcaacgtagta 792
Query: 722 agattttcttagtaactcacaaattccggcccagtaagtagatatatatatgtacgtctt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agattttcttagtaactcacaaattccggcccagtaagtagatatatatatgtacgtctt 852
Query: 782 ttttcggcattgtagagcatctgctgtaactttatcagctgtcattactttctgctcggt 841
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 853 ttttcggcattgtagagcatctgctgtaagcttatcagctgtcattactttctgctcggt 912
Query: 842 cagcattgatgaaaacccggctcatatctcattaacttcgcctcgctcctaatgtaaaga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 cagcattgatgaaaacccggctcatatctcattaacttcgcctcgctcctaatgtaaaga 972
Query: 902 tatatacctaagarataataaggaatgataagtgaatctatcc-aaaacctggt-cmact 959
||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | |||
Sbjct: 973 tatatacctaagaaataataaggaatgataagtgaatctatccaaaaacctggtccaact 1032
Query: 960 attcttc-acctagttttctttcactgtg 987
||||||| |||||||||||||||||||||
Sbjct: 1033 attcttcaacctagttttctttcactgtg 1061
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5895
Number of Sequences: 1807
Number of extensions: 5895
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)